Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs13322493 chr3:124571469 G/T 7.48E-6 286 26.07 26 16.4 KM Plot
KIRP rs13382459 chr2:198252686 C/G 0 289 4.63 21.27 26.1 KM Plot
KIRP rs13406024 chr2:47175622 T/A 3.13E-7 286 25.5 32.55 10.97 KM Plot
KIRP rs13409489 chr2:47162792 A/G 2.62E-7 287 25.5 33.53 10.97 KM Plot
KIRP rs1342143 chr10:43346131 C/G 7.2E-5 289 25.4 26.73 13.07 KM Plot
KIRP rs13421835 chr2:128625063 G/A 1.14E-9 286 26 22.37 4.98 KM Plot
KIRP rs13424086 chr2:47129502 G/C 2.19E-7 289 25.37 34.43 10.97 KM Plot
KIRP rs13429890 chr2:180335580 G/C 1.33E-11 288 23.97 41.33 8.6 KM Plot
KIRP rs13430703 chr2:47158050 T/A 2.62E-7 287 25.5 33.53 10.97 KM Plot
KIRP rs13432576 chr2:162012983 T/C 1.95E-12 289 26.37 21.97 8.47 KM Plot
KIRP rs1365082 chr11:43084753 A/G 1.11E-5 289 25.58 27.47 16.77 KM Plot
KIRP rs1367766 chr3:197173841 T/C 9.74E-6 277 25.23 26.8 18.45 KM Plot
KIRP rs1378166 chr3:16043796 A/C 9.13E-5 284 20.4 27.88 25.57 KM Plot
KIRP rs1378169 chr3:16010612 C/G 1.48E-5 289 25.65 26 21.02 KM Plot
KIRP rs138024639 chr6:28436014 TAAACATA/T 2.3E-8 283 25.58 28.02 9.77 KM Plot